Protein-Protein Contact Prediction Using Structure-Informed Sequences and Protein Language Models
摘要
In recent years, deep learning techniques have enabled the development of numerous methods for protein contact prediction, achieving significant success. This study introduces a protein contact prediction model based on a deep residual network, named Se-Inter. Unlike previous deep learning approaches, we leverage structure-informed residue sequences combined with protein language models to construct features. We conducted extensive evaluations of Se-Inter on multiple test datasets and compared it with several mainstream protein contact prediction methods, including DeepHomo, GLINTER, and DRN-1D2D-Inter. The results demonstrate the accuracy and robustness of Se-Inter.