The investigation provides a detailed analysis of the quantum mechanisms by which Raman pulses interacts with DNA/RNA and proteins biomolecules, emphasizing of bounding of super molecular structures synthesized from tertiary protein components. A nonlinear model was developed based on cooperative processes similar to Raman multiple scattering, in integrating with bio-molecular structures. Taking into consideration the possible packing protein structures, a main attention is given to Kasha model stimulated by multiple Raman Conversion. The excited states for trimer, tetramer and pentamer are give for the evidence of existing stable exciton state in such supra-structures coherently generated by Raman conversion. The master equation which describe the synthesis of such a stable structures under the Raman excitation is proposed. Two possibilities of generation of quantum states between bonding and unboding super molecular states a proposed. This investigation may have highlights practical applications in the development of high-efficiency in the construction of modern decontamination equipment using advanced optical metamaterials. The dependence of decontamination rate of pathogens as function of applied field is proposed. In experimental equipment Instead of pathogens we used the yeast fungi which have larger resistance in comparison with pathogens (viruses and bacteria). The two decontamination rates as function of applied ultraviolet C radiation was observed in nanosecond pulse interaction with yeast bio-molecules, which may be explained by proposed multiple Raman dimerization model of bio-molecules.