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Predicting a joint secondary structure formed by two RNAs plays a key role in understanding mechanisms and functions of complex RNA–RNA interactions. Here we describe a practical procedure of a fast and accurate computational method for predicting joint structures based on integer programming.

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Prediction of RNA Joint Secondary Structures Based on Integer Programming

  • 实验方案

  • 发表日期：

    2026年

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  • Yuki Kato,
  • Kengo Sato

摘要

Predicting a joint secondary structure formed by two RNAs plays a key role in understanding mechanisms and functions of complex RNA–RNA interactions. Here we describe a practical procedure of a fast and accurate computational method for predicting joint structures based on integer programming.