Background <p>Diffuse gliomas like glioblastoma, astrocytoma, and oligodendroglioma are defined by complex heterogeneity in imaging and molecular patterns. Traditional diagnosis relies severely on invasive biopsies and human interpretation of MRI scans, which are subjective and severely limited in capturing the complete volumetric and biological heterogeneity of the tumor. Artificial Intelligence (AI) can potentially enhance glioma tumor subtype classification through the analysis and interpretation of medical imaging information. Machine learning, a branch of AI, is key to discovering patterns and characteristics in the data to enable predictive models for prognosis and diagnosis. AI can process MRI scans to derive tumor shape, size, and texture information, and process large datasets to define risk factors and features. This method may improve the speed and accuracy of glioma subtype diagnoses and facilitate individualized treatment planning.</p> Aim <p>In the current study, we have evaluated the performance of multiple machine learning classifiers in distinguishing between glioblastoma, astrocytoma, and oligodendroglioma based on radiomics and clinical features. The goal of the study was to identify effective feature selection techniques that enhance the accuracy and reliability of classification models and to develop a methodology that can be adapted for use with imaging data collected at our institute, supporting future diagnostic workflows.</p> Methods <p>A total 729 radiomic features were expended from TCIA for the experimental analysis. The radiomic signature of significant features has been created for every sample using XGBoost decision tree, XGBoost random forest, CatBoost and Light GBM tree based feature selection algorithm. The experimentation has been done by training 13 different models. The hyper parameters of each of the model has been tuned and different performance parameters like accuracy, precision, recall, F1 score and AUC-ROC curve have been compared.</p> Results <p>Feature selection using XGBoost decision tree, XGBoost random forest, Catboost and Light GBM tree- based classifier is used for selecting the top 21, 37, 71 and 82 features based on feature importance score. The experimental results shows that the feature subset by XGBoost decision tree method gave the best performance as compared to others. A total of 13 classification models were trained and tested giving a best tenfold validation accuracy, test accuracy, macro F1-score of 95.2%, 77%, 0.716 and AUC of 0.92 for Catboost classifier.</p>

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Diffuse glioma tumor subtype classification using CliRad (clinical + radiomics) features

  • Priyanka Verma,
  • Vaishali Kulkarni,
  • Archya Dasgupta,
  • Abhishek Chatterjee,
  • Tejpal Gupta

摘要

Background

Diffuse gliomas like glioblastoma, astrocytoma, and oligodendroglioma are defined by complex heterogeneity in imaging and molecular patterns. Traditional diagnosis relies severely on invasive biopsies and human interpretation of MRI scans, which are subjective and severely limited in capturing the complete volumetric and biological heterogeneity of the tumor. Artificial Intelligence (AI) can potentially enhance glioma tumor subtype classification through the analysis and interpretation of medical imaging information. Machine learning, a branch of AI, is key to discovering patterns and characteristics in the data to enable predictive models for prognosis and diagnosis. AI can process MRI scans to derive tumor shape, size, and texture information, and process large datasets to define risk factors and features. This method may improve the speed and accuracy of glioma subtype diagnoses and facilitate individualized treatment planning.

Aim

In the current study, we have evaluated the performance of multiple machine learning classifiers in distinguishing between glioblastoma, astrocytoma, and oligodendroglioma based on radiomics and clinical features. The goal of the study was to identify effective feature selection techniques that enhance the accuracy and reliability of classification models and to develop a methodology that can be adapted for use with imaging data collected at our institute, supporting future diagnostic workflows.

Methods

A total 729 radiomic features were expended from TCIA for the experimental analysis. The radiomic signature of significant features has been created for every sample using XGBoost decision tree, XGBoost random forest, CatBoost and Light GBM tree based feature selection algorithm. The experimentation has been done by training 13 different models. The hyper parameters of each of the model has been tuned and different performance parameters like accuracy, precision, recall, F1 score and AUC-ROC curve have been compared.

Results

Feature selection using XGBoost decision tree, XGBoost random forest, Catboost and Light GBM tree- based classifier is used for selecting the top 21, 37, 71 and 82 features based on feature importance score. The experimental results shows that the feature subset by XGBoost decision tree method gave the best performance as compared to others. A total of 13 classification models were trained and tested giving a best tenfold validation accuracy, test accuracy, macro F1-score of 95.2%, 77%, 0.716 and AUC of 0.92 for Catboost classifier.