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<p>Metagenomic analyses of microbial communities have unveiled a substantial level of interspecies and intraspecies genetic diversity by reconstructing metagenome-assembled genomes (MAGs). The MAG database (MAGdb) boasts an impressive collection of 74 representative research papers, spanning clinical, environmental, and animal categories and comprising 13,702 paired-end run accessions of metagenomic sequencing and 99,672 high quality MAGs with manually curated metadata. MAGdb provides a user-friendly interface that users can browse, search, and download MAGs and their corresponding metadata information. It represents a valuable resource for researchers in discovering potential novel microbial lineages and understanding their ecological roles. MAGdb is publicly available at <a href="https://magdb.nanhulab.ac.cn/">https://magdb.nanhulab.ac.cn/</a>.</p>

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MAGdb: a comprehensive high quality MAGs repository for exploring microbial metagenome-assemble genomes

  • 期刊论文

  • 出版模式：

    开放获取

  • 发表日期：

    2025年9月10日

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  • Guo Ye,
  • Hao Hong,
  • Ting Li,
  • Jin Li,
  • Jia-Qi Wu,
  • Shuai Jiang,
  • Zhi-Tong Meng,
  • He-Tian Yuan,
  • Wen Xue,
  • Ai-Ling Li,
  • Tao Zhou,
  • Ting-Ting Li,
  • Tao Li

摘要

Metagenomic analyses of microbial communities have unveiled a substantial level of interspecies and intraspecies genetic diversity by reconstructing metagenome-assembled genomes (MAGs). The MAG database (MAGdb) boasts an impressive collection of 74 representative research papers, spanning clinical, environmental, and animal categories and comprising 13,702 paired-end run accessions of metagenomic sequencing and 99,672 high quality MAGs with manually curated metadata. MAGdb provides a user-friendly interface that users can browse, search, and download MAGs and their corresponding metadata information. It represents a valuable resource for researchers in discovering potential novel microbial lineages and understanding their ecological roles. MAGdb is publicly available at https://magdb.nanhulab.ac.cn/.