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DNAJC9 prevents CENP-A mislocalization and chromosomal instability by maintaining the fidelity of histone supply chains

  • Vinutha Balachandra,
  • Roshan L Shrestha,
  • Colin M Hammond,
  • Shinjen Lin,
  • Ivo A Hendriks,
  • Subhash Chandra Sethi,
  • Lu Chen,
  • Samantha Sevilla,
  • Natasha J Caplen,
  • Raj Chari,
  • Tatiana S Karpova,
  • Katherine McKinnon,
  • Matthew AM Todd,
  • Vishal Koparde,
  • Ken Chih-Chien Cheng,
  • Michael L Nielsen,
  • Anja Groth,
  • Munira A Basrai

摘要

The centromeric histone H3 variant CENP-A is overexpressed in many cancers. The mislocalization of CENP-A to noncentromeric regions contributes to chromosomal instability (CIN), a hallmark of cancer. However, pathways that promote or prevent CENP-A mislocalization remain poorly defined. Here, we performed a genome-wide RNAi screen for regulators of CENP-A localization which identified DNAJC9, a J-domain protein implicated in histone H3–H4 protein folding, as a factor restricting CENP-A mislocalization. Cells lacking DNAJC9 exhibit mislocalization of CENP-A throughout the genome, and CIN phenotypes. Global interactome analysis showed that DNAJC9 depletion promotes the interaction of CENP-A with the DNA-replication-associated histone chaperone MCM2. CENP-A mislocalization upon DNAJC9 depletion was dependent on MCM2, defining MCM2 as a driver of CENP-A deposition at ectopic sites when H3–H4 supply chains are disrupted. Cells depleted for histone H3.3, also exhibit CENP-A mislocalization. In summary, we have defined novel factors that prevent mislocalization of CENP-A, and demonstrated that the integrity of H3–H4 supply chains regulated by histone chaperones such as DNAJC9 restrict CENP-A mislocalization and CIN.