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Mechanistic insight into benzylidene-directed glycosylation reactions using cryogenic infrared spectroscopy

  • Chun-Wei Chang,
  • Kim Greis,
  • Gurpur Rakesh D. Prabhu,
  • Dana Wehner,
  • Carla Kirschbaum,
  • Katja Ober,
  • América Y. Torres-Boy,
  • Sabrina Leichnitz,
  • Gerard Meijer,
  • Gert von Helden,
  • Peter H. Seeberger,
  • Kevin Pagel

摘要

The stereoselective formation of 1,2-cis glycosidic linkages is challenging. The currently most widely used strategy for their installation uses 4,6-O-benzylidene-protected building blocks. The stereoselectivity of this reaction is thought to be driven by a covalent intermediate, which reacts via an SN2 mechanism. However, the role of cationic SN1-type intermediates in this reaction is unclear. Here we elucidate the structure of glycosyl cations carrying 4,6-O-benzylidene groups using cryogenic infrared ion spectroscopy and computational methods. The data reveal that the intermediates form anhydro cations, which correlates well with the stereoselective outcome of SN1-type glycosylations. The study highlights how cryogenic infrared spectroscopy can elucidate the role of intermediates in sugar chemistry and how these structural data can be linked to reactions in solution.