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FGFR2-fusions define a clinically actionable molecular subset of pancreatic cancer

  • Leah Stein,
  • Karthikeyan Murugesan,
  • Julie W. Reeser,
  • Zachary Risch,
  • Michele R. Wing,
  • Anoosha Paruchuri,
  • Eric Samorodnitsky,
  • Emily L. Hoskins,
  • Thuy Dao,
  • Amy Smith,
  • Dat Le,
  • Melissa A. Babcook,
  • Yi Seok Chang,
  • Matthew R. Avenarius,
  • Muhammad Imam,
  • Aharon G. Freud,
  • Sameek Roychowdhury

摘要

Genomic alterations in fibroblast growth factor receptor (FGFR) genes are present in a small number of metastatic pancreatic ductal adenocarcinomas (PDAC) and may represent an emerging subgroup of patients likely to benefit from FGFR targeted therapies. Here we present four FGFR2 fusion-positive metastatic PDAC patients who exhibited durable responses or disease control to FGFR kinase inhibitors. Utilizing our custom FGFR focused cell-free DNA assay, FGFR-Dx, we serially monitored variant allele fractions of FGFR2 fusions during FGFR inhibitor treatment and observed dynamic changes correlating with clinical responses. Genomic analysis of 30,229 comprehensively profiled pancreatic cancers revealed FGFR1-3 fusions in 245 cases, an incidence of 0.81%. FGFR fusions were generally mutually exclusive from other known oncogenes. Our findings provide clinical evidence for identifying and treating FGFR2 fusion-positive PDAC patients with FGFR targeted therapy.