Genome-based analysis of Bacillus velezensis Bm3 isolated from a vulnerable dioxin-contaminated site in central Syria reveals mechanisms of dioxin degradation
摘要
Dioxin contamination represents a serious global environmental threat, particularly in developing and climate-vulnerable regions. This study evaluates the potential of Bacillus velezensis Bm3, isolated from a dioxin-contaminated site in central Syria, for the aerobic biodegradation of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). Quantitative analyses demonstrated a strong biodegradative capacity, with 71% and 76% of the initial TCDD concentration removed after 5 and 6 weeks, respectively. Whole-genome sequencing revealed a 5.29 Mbp genome encoding 5411 predicted proteins, providing a solid genetic basis for this activity. A two-step degradation pathway is proposed, initiated by cytochrome P450-mediated hydroxylation of TCDD to dihydroxy-hydrodibenzo-p-dioxin, followed by conversion to the key intermediate catechol. This compound is subsequently cleaved by catechol 2,3-dioxygenase, yielding acetaldehyde and pyruvate. Gene expression and protein accumulation analyses supported this mechanism, showing strong induction of a specific cytochrome P450 isoform (CYPBM3_v1_ua3131) and cat-2,3-diox transcripts. These findings identify B. velezensis Bm3 as a promising candidate for TCDD bioremediation in warm, dry environments.