Scholarlink

<p>The current study compares the transcriptomic data sets of post-imbibitional NaCl salinity stress (PISS)- raised seedlings of two contrasting land races of coastal areas of Sundarban Bangladesh (<i>Oryza sativa</i> L., Landraces Kutepatnai and Charobalam) for unfolding genetic regulation of salinity stress under altered redox and metabolic landscape. Illumina platform-based RNA-seq analysis exposed important landrace-specific gene expression under PISS that substantiate the data of altered redox cue (relative changes in redox interactome status) and changes in ion and hormonal homeostasis. Heat map generation from selected transcripts with their functional annotations identified genes that are suggestively expressed and mainly associated with redox signaling pathway, metabolisms, cell wall organization, transport, cell cycle regulation and molecular trafficking. Comparative analysis of gene ontology revealed that salinity resistance of Kutepatnai is attributable to superior expression of genes associated with cell signaling, cell proliferation, transporter and molecular transducer activity, biological and metabolic regulation etc. Genes associated with redox regulation and coding transcription factors got significantly over expressed in landrace Kutepatnai <i>vis-a-vis</i> Charobalam. We suggest the significance of the role of redox signalling and MAP kinase pathways for inducing important transcription factors necessary for up-regulation of defence genes necessary for salinity tolerance.</p>

错误：搜索内容不能为空，请输入英文关键词
错误：关键词超出字数限制，请精简
高级检索

Impact of redox control on transcriptional reprograming for salt tolerance in coastal rice landraces

  • 期刊论文

  • 出版模式：

    开放获取

  • 发表日期：

    2025年12月2日

查看全文
  • Uthpal Krishna Roy,
  • Babita Pal,
  • Soumen Bhattacharjee

摘要

The current study compares the transcriptomic data sets of post-imbibitional NaCl salinity stress (PISS)- raised seedlings of two contrasting land races of coastal areas of Sundarban Bangladesh (Oryza sativa L., Landraces Kutepatnai and Charobalam) for unfolding genetic regulation of salinity stress under altered redox and metabolic landscape. Illumina platform-based RNA-seq analysis exposed important landrace-specific gene expression under PISS that substantiate the data of altered redox cue (relative changes in redox interactome status) and changes in ion and hormonal homeostasis. Heat map generation from selected transcripts with their functional annotations identified genes that are suggestively expressed and mainly associated with redox signaling pathway, metabolisms, cell wall organization, transport, cell cycle regulation and molecular trafficking. Comparative analysis of gene ontology revealed that salinity resistance of Kutepatnai is attributable to superior expression of genes associated with cell signaling, cell proliferation, transporter and molecular transducer activity, biological and metabolic regulation etc. Genes associated with redox regulation and coding transcription factors got significantly over expressed in landrace Kutepatnai vis-a-vis Charobalam. We suggest the significance of the role of redox signalling and MAP kinase pathways for inducing important transcription factors necessary for up-regulation of defence genes necessary for salinity tolerance.