<p>Gen3 is an open-source data platform for building data commons. A data commons is a cloud-based data platform for managing, analyzing, and sharing data with a research community. Gen3 has been used to build over 30 data commons by different organizations around the world. To set up a Gen3 data commons, you first define a data model. Gen3 then autogenerates 1) a data portal for searching and exploring data in the commons; 2) a data portal for submitting data to the commons; and 3) FAIR APIs for accessing the data programmatically. Gen3 is built over a small number of standards-based software services, which are designed to support current and future Gen3 components so that Gen3 can interoperate with other data platforms and data ecosystems.</p>

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Managing, Analyzing and Sharing Research Data with Gen3 Data Commons

  • Craig Barnes,
  • Kyle Burton,
  • Michael S. Fitzsimons,
  • Hara Prasad Juvvala,
  • Brienna Larrick,
  • Ao Liu,
  • Clint Malson,
  • Noah Metoki-Shlubsky,
  • Christopher Meyer,
  • Andrii Prokhorenkov,
  • Jawad Qureshi,
  • Radhika Reddy,
  • Pauline Ribeyre,
  • L. Philip Schumm,
  • Mingfei Shao,
  • Trevar Simmons,
  • Alexander VanTol,
  • Peter Vassilatos,
  • Aarti Venkat,
  • Robert L. Grossman

摘要

Gen3 is an open-source data platform for building data commons. A data commons is a cloud-based data platform for managing, analyzing, and sharing data with a research community. Gen3 has been used to build over 30 data commons by different organizations around the world. To set up a Gen3 data commons, you first define a data model. Gen3 then autogenerates 1) a data portal for searching and exploring data in the commons; 2) a data portal for submitting data to the commons; and 3) FAIR APIs for accessing the data programmatically. Gen3 is built over a small number of standards-based software services, which are designed to support current and future Gen3 components so that Gen3 can interoperate with other data platforms and data ecosystems.