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<p><i>Salvelinus malma</i>, belonging to the Salmonidae family, is a critically endangered species in China. To support genetic research and strengthen the protection of wild fish resources, the first chromosome-level reference genome of <i>S. malma</i> was generated through the integrated technologies of PacBio and Hi-C sequencing. The genome assembly has a total length of 2.52 Gb with contigs assigned to 42 chromosomes. A total of 45,385 protein-coding genes were annotated with excellent 98.8% BUSCOs completeness. The chromosome-level genome of <i>S. malma</i> will serve as a valuable resource for functional genomics research and greatly facilitate the ecological conservation in the future.</p>

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The chromosome-level genome assembly and annotation of Salvelinus malma

  • 期刊论文

  • 出版模式：

    开放获取

  • 发表日期：

    2025年11月28日

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  • Xiangbing Zeng,
  • Lijun Hu,
  • Jiahao Zhang,
  • Yuan Yao,
  • Hancheng Bao,
  • Dan Li,
  • Qinfeng Gao,
  • Yuan Tian

摘要

Salvelinus malma, belonging to the Salmonidae family, is a critically endangered species in China. To support genetic research and strengthen the protection of wild fish resources, the first chromosome-level reference genome of S. malma was generated through the integrated technologies of PacBio and Hi-C sequencing. The genome assembly has a total length of 2.52 Gb with contigs assigned to 42 chromosomes. A total of 45,385 protein-coding genes were annotated with excellent 98.8% BUSCOs completeness. The chromosome-level genome of S. malma will serve as a valuable resource for functional genomics research and greatly facilitate the ecological conservation in the future.