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Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms

  • Qian Li,
  • Jun Zhang,
  • Cory Haluska,
  • Xiang Zhang,
  • Lei Wang,
  • Guangfeng Liu,
  • Zhaoning Wang,
  • Duo Jin,
  • Tong Cheng,
  • Hongxia Wang,
  • Yuan Tian,
  • Xiangxi Wang,
  • Lei Sun,
  • Xiaolan Zhao,
  • Zhenguo Chen,
  • Lanfeng Wang

摘要

Smc5/6 is a member of the eukaryotic structural maintenance of chromosomes (SMC) family of complexes with important roles in genome maintenance and viral restriction. However, limited structural understanding of Smc5/6 hinders the elucidation of its diverse functions. Here, we report cryo-EM structures of the budding yeast Smc5/6 complex in eight-subunit, six-subunit and five-subunit states. Structural maps throughout the entire length of these complexes reveal modularity and key elements in complex assembly. We show that the non-SMC element (Nse)2 subunit supports the overall shape of the complex and uses a wedge motif to aid the stability and function of the complex. The Nse6 subunit features a flexible hook region for attachment to the Smc5 and Smc6 arm regions, contributing to the DNA repair roles of the complex. Our results also suggest a structural basis for the opposite effects of the Nse1–3–4 and Nse5–6 subcomplexes in regulating Smc5/6 ATPase activity. Collectively, our integrated structural and functional data provide a framework for understanding Smc5/6 assembly and function.