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A shared neoantigen vaccine combined with immune checkpoint blockade for advanced metastatic solid tumors: phase 1 trial interim results

  • Amy R. Rappaport,
  • Chrisann Kyi,
  • Monica Lane,
  • Meghan G. Hart,
  • Melissa L. Johnson,
  • Brian S. Henick,
  • Chih-Yi Liao,
  • Amit Mahipal,
  • Ardaman Shergill,
  • Alexander I. Spira,
  • Jonathan W. Goldman,
  • Ciaran D. Scallan,
  • Desiree Schenk,
  • Christine D. Palmer,
  • Matthew J. Davis,
  • Sonia Kounlavouth,
  • Lindsey Kemp,
  • Aaron Yang,
  • Yaojun John Li,
  • Molly Likes,
  • Annie Shen,
  • Gregory R. Boucher,
  • Milana Egorova,
  • Robert L. Veres,
  • J. Aaron Espinosa,
  • Jason R. Jaroslavsky,
  • Lauren D. Kraemer Tardif,
  • Lindsey Acrebuche,
  • Christopher Puccia,
  • Leiliane Sousa,
  • Rita Zhou,
  • Kyounghwa Bae,
  • J. Randolph Hecht,
  • David P. Carbone,
  • Benny Johnson,
  • Andrew Allen,
  • Andrew R. Ferguson,
  • Karin Jooss

摘要

Therapeutic vaccines that elicit cytotoxic T cell responses targeting tumor-specific neoantigens hold promise for providing long-term clinical benefit to patients with cancer. Here we evaluated safety and tolerability of a therapeutic vaccine encoding 20 shared neoantigens derived from selected common oncogenic driver mutations as primary endpoints in an ongoing phase 1/2 study in patients with advanced/metastatic solid tumors. Secondary endpoints included immunogenicity, overall response rate, progression-free survival and overall survival. Eligible patients were selected if their tumors expressed one of the human leukocyte antigen-matched tumor mutations included in the vaccine, with the majority of patients (18/19) harboring a mutation in KRAS. The vaccine regimen, consisting of a chimp adenovirus (ChAd68) and self-amplifying mRNA (samRNA) in combination with the immune checkpoint inhibitors ipilimumab and nivolumab, was shown to be well tolerated, with observed treatment-related adverse events consistent with acute inflammation expected with viral vector-based vaccines and immune checkpoint blockade, the majority grade 1/2. Two patients experienced grade 3/4 serious treatment-related adverse events that were also dose-limiting toxicities. The overall response rate was 0%, and median progression-free survival and overall survival were 1.9 months and 7.9 months, respectively. T cell responses were biased toward human leukocyte antigen-matched TP53 neoantigens encoded in the vaccine relative to KRAS neoantigens expressed by the patients’ tumors, indicating a previously unknown hierarchy of neoantigen immunodominance that may impact the therapeutic efficacy of multiepitope shared neoantigen vaccines. These data led to the development of an optimized vaccine exclusively targeting KRAS-derived neoantigens that is being evaluated in a subset of patients in phase 2 of the clinical study. ClinicalTrials.gov registration: NCT03953235.