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De novo design of proteins housing excitonically coupled chlorophyll special pairs

  • Nathan M. Ennist,
  • Shunzhi Wang,
  • Madison A. Kennedy,
  • Mariano Curti,
  • George A. Sutherland,
  • Cvetelin Vasilev,
  • Rachel L. Redler,
  • Valentin Maffeis,
  • Saeed Shareef,
  • Anthony V. Sica,
  • Ash Sueh Hua,
  • Arundhati P. Deshmukh,
  • Adam P. Moyer,
  • Derrick R. Hicks,
  • Avi Z. Swartz,
  • Ralph A. Cacho,
  • Naia Novy,
  • Asim K. Bera,
  • Alex Kang,
  • Banumathi Sankaran,
  • Matthew P. Johnson,
  • Amala Phadkule,
  • Mike Reppert,
  • Damian Ekiert,
  • Gira Bhabha,
  • Lance Stewart,
  • Justin R. Caram,
  • Barry L. Stoddard,
  • Elisabet Romero,
  • C. Neil Hunter,
  • David Baker

摘要

Natural photosystems couple light harvesting to charge separation using a ‘special pair’ of chlorophyll molecules that accepts excitation energy from the antenna and initiates an electron-transfer cascade. To investigate the photophysics of special pairs independently of the complexities of native photosynthetic proteins, and as a first step toward creating synthetic photosystems for new energy conversion technologies, we designed C2-symmetric proteins that hold two chlorophyll molecules in closely juxtaposed arrangements. X-ray crystallography confirmed that one designed protein binds two chlorophylls in the same orientation as native special pairs, whereas a second designed protein positions them in a previously unseen geometry. Spectroscopy revealed that the chlorophylls are excitonically coupled, and fluorescence lifetime imaging demonstrated energy transfer. The cryo-electron microscopy structure of a designed 24-chlorophyll octahedral nanocage with a special pair on each edge closely matched the design model. The results suggest that the de novo design of artificial photosynthetic systems is within reach of current computational methods.