<p>Clonally expanded CD4<sup>+</sup> T cells harbouring rebound-competent HIV persist lifelong during antiretroviral therapy<sup><CitationRef AdditionalCitationIDS="CR2 CR3 CR4" CitationID="CR1">1</CitationRef>–<CitationRef CitationID="CR5">5</CitationRef></sup>. Latency is considered the principal barrier to viral eradication and has resisted pharmacological reversal<sup><CitationRef CitationID="CR6">6</CitationRef>,<CitationRef CitationID="CR7">7</CitationRef></sup>, yet sustained immune pressure appears to erode reservoirs<sup><CitationRef AdditionalCitationIDS="CR9 CR10 CR11 CR12 CR13 CR14" CitationID="CR8">8</CitationRef>–<CitationRef CitationID="CR15">15</CitationRef></sup>. Recent advances have yielded glimpses into exceptionally rare reservoir-harbouring cells, implicating prosurvival properties in persistence<sup><CitationRef AdditionalCitationIDS="CR17" CitationID="CR16">16</CitationRef>–<CitationRef CitationID="CR18">18</CitationRef></sup>. Here we isolate and characterize authentic reservoir clones (ARCs) that robustly proliferate and accumulate while producing infectious virus, without overtly succumbing to cytopathicity. At any moment, only small fractions of ARCs expressed HIV proteins, a state associated with conserved host transcriptional programs but remarkably refractory to potent T cell stimulation. Nevertheless, sustained co-culture with a CD8<sup>+</sup> cytotoxic T lymphocyte clone substantially culled proliferating ARCs, revealing time-integrated vulnerability to immune pressure. The corresponding ex vivo CD8<sup>+</sup> T cell response was poorly cytotoxic, and in vivo erosion of ARCs occurred only slowly. A regulatory T cell ARC displayed pronounced cell-intrinsic resistance to cytotoxic T cells — a longstanding hypothesis now directly demonstrated — linked to low oxidative stress and reversed with deferoxamine<sup><CitationRef CitationID="CR19">19</CitationRef></sup>, a hypoxic stress inducer and FDA-approved therapeutic. Overall, we provide insights into the vulnerabilities of reservoir clones to potent, sustained cytotoxic T cell pressure and highlight intrinsic resistance pathways as actionable therapeutic targets, opening opportunities for advancing immune-based HIV cure strategies.</p>

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Dynamic antigen expression and cytotoxic T cell resistance in HIV reservoir clones

  • Isabella A. T. M. Ferreira,
  • Alberto Herrera,
  • Tan Thinh Huynh,
  • Emily Stone,
  • Noemi L. Linden,
  • Cristian Ovies,
  • Yanqin Ren,
  • Cintia Bittar,
  • Virender K. Pal,
  • Ethan Naing,
  • Parul Sinha,
  • Ali Danesh,
  • Eva Stevenson,
  • Shane Vedova,
  • Fitty Liu,
  • Louise Leyre,
  • Skylar Shea,
  • Elina Wells,
  • Itzayana G. Miller,
  • Marie Canis,
  • Ana Rafaela Teixeira,
  • Susan Moir,
  • Tae-Wook Chun,
  • Colin Kovacs,
  • Madeleine S. Gastonguay,
  • Alison L. Hill,
  • Shy Genel,
  • Paul Zumbo,
  • Doron Betel,
  • Elias K. Halvas,
  • Guinevere Q. Lee,
  • Rachel Scheck,
  • Marina Caskey,
  • Paul D. Bieniasz,
  • Nathan L. Board,
  • Michel C. Nussenzweig,
  • R. Brad Jones

摘要

Clonally expanded CD4+ T cells harbouring rebound-competent HIV persist lifelong during antiretroviral therapy15. Latency is considered the principal barrier to viral eradication and has resisted pharmacological reversal6,7, yet sustained immune pressure appears to erode reservoirs815. Recent advances have yielded glimpses into exceptionally rare reservoir-harbouring cells, implicating prosurvival properties in persistence1618. Here we isolate and characterize authentic reservoir clones (ARCs) that robustly proliferate and accumulate while producing infectious virus, without overtly succumbing to cytopathicity. At any moment, only small fractions of ARCs expressed HIV proteins, a state associated with conserved host transcriptional programs but remarkably refractory to potent T cell stimulation. Nevertheless, sustained co-culture with a CD8+ cytotoxic T lymphocyte clone substantially culled proliferating ARCs, revealing time-integrated vulnerability to immune pressure. The corresponding ex vivo CD8+ T cell response was poorly cytotoxic, and in vivo erosion of ARCs occurred only slowly. A regulatory T cell ARC displayed pronounced cell-intrinsic resistance to cytotoxic T cells — a longstanding hypothesis now directly demonstrated — linked to low oxidative stress and reversed with deferoxamine19, a hypoxic stress inducer and FDA-approved therapeutic. Overall, we provide insights into the vulnerabilities of reservoir clones to potent, sustained cytotoxic T cell pressure and highlight intrinsic resistance pathways as actionable therapeutic targets, opening opportunities for advancing immune-based HIV cure strategies.