<p>Lung cancer in never&#xa0;smokers (LCINS) accounts for around 25% of all lung cancers<sup><CitationRef CitationID="CR1">1</CitationRef>,<CitationRef CitationID="CR2">2</CitationRef></sup> and has been associated with exposure to second-hand tobacco smoke and air pollution in observational studies<sup><CitationRef AdditionalCitationIDS="CR4" CitationID="CR3">3</CitationRef>–<CitationRef CitationID="CR5">5</CitationRef></sup>. Here we use data from the Sherlock-<i>Lung</i> study to evaluate mutagenic exposures in LCINS by examining the cancer&#xa0;genomes of 871 treatment-naive individuals with lung cancer who had never smoked, from 28 geographical locations. <i>KRAS</i> mutations were 3.8 times more common in adenocarcinomas of never&#xa0;smokers from North America and Europe&#xa0;than in those from East Asia, whereas a higher prevalence of <i>EGFR</i> and <i>TP53</i> mutations was observed in adenocarcinomas of never&#xa0;smokers from East Asia. Signature SBS40a, with unknown cause<sup><CitationRef CitationID="CR6">6</CitationRef></sup>, contributed the largest proportion of single base substitutions in adenocarcinomas, and was enriched in cases with <i>EGFR</i> mutations. Signature SBS22a, which is associated with exposure to aristolochic acid<sup><CitationRef CitationID="CR7">7</CitationRef>,<CitationRef CitationID="CR8">8</CitationRef></sup>, was observed almost exclusively in patients from Taiwan. Exposure to secondhand smoke was not associated with individual driver mutations or mutational signatures. By contrast, patients from regions with high levels of air pollution were more likely to have <i>TP53</i> mutations and shorter telomeres. They also exhibited an increase in most types of mutations, including a 3.9-fold increase in signature SBS4, which has previously been linked with tobacco smoking<sup><CitationRef CitationID="CR9">9</CitationRef></sup>, and a 76% increase in the clock-like<sup><CitationRef CitationID="CR10">10</CitationRef></sup> signature SBS5. A positive dose–response effect was observed with air-pollution levels, correlating with both a decrease in telomere length and an increase in somatic mutations, mainly&#xa0;attributed to signatures SBS4 and SBS5. Our results elucidate the diversity of mutational processes shaping the genomic landscape of lung cancer in never&#xa0;smokers.</p>

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The mutagenic forces shaping the genomes of lung cancer in never smokers

  • Marcos Díaz-Gay,
  • Tongwu Zhang,
  • Phuc H. Hoang,
  • Charles Leduc,
  • Marina K. Baine,
  • William D. Travis,
  • Lynette M. Sholl,
  • Philippe Joubert,
  • Azhar Khandekar,
  • Wei Zhao,
  • Christopher D. Steele,
  • Burçak Otlu,
  • Shuvro P. Nandi,
  • Raviteja Vangara,
  • Erik N. Bergstrom,
  • Mariya Kazachkova,
  • Oriol Pich,
  • Charles Swanton,
  • Chao Agnes Hsiung,
  • I-Shou Chang,
  • Maria Pik Wong,
  • Kin Chung Leung,
  • Jian Sang,
  • John P. McElderry,
  • Caleb Hartman,
  • Frank J. Colón-Matos,
  • Mona Miraftab,
  • Monjoy Saha,
  • Olivia W. Lee,
  • Kristine M. Jones,
  • Pilar Gallego-García,
  • Yang Yang,
  • Xiaoming Zhong,
  • Eric S. Edell,
  • Jacobo Martínez Santamaría,
  • Matthew B. Schabath,
  • Sai S. Yendamuri,
  • Marta Manczuk,
  • Jolanta Lissowska,
  • Beata Świątkowska,
  • Anush Mukeria,
  • Oxana Shangina,
  • David Zaridze,
  • Ivana Holcatova,
  • Dana Mates,
  • Sasa Milosavljevic,
  • Milica Kontic,
  • Yohan Bossé,
  • Bonnie E. Gould Rothberg,
  • David C. Christiani,
  • Valerie Gaborieau,
  • Paul Brennan,
  • Geoffrey Liu,
  • Paul Hofman,
  • Lixing Yang,
  • Martin A. Nowak,
  • Jianxin Shi,
  • Nathaniel Rothman,
  • David C. Wedge,
  • Robert Homer,
  • Soo-Ryum Yang,
  • Angela C. Pesatori,
  • Dario Consonni,
  • Qing Lan,
  • Bin Zhu,
  • Stephen J. Chanock,
  • Jiyeon Choi,
  • Ludmil B. Alexandrov,
  • Maria Teresa Landi

摘要

Lung cancer in never smokers (LCINS) accounts for around 25% of all lung cancers1,2 and has been associated with exposure to second-hand tobacco smoke and air pollution in observational studies35. Here we use data from the Sherlock-Lung study to evaluate mutagenic exposures in LCINS by examining the cancer genomes of 871 treatment-naive individuals with lung cancer who had never smoked, from 28 geographical locations. KRAS mutations were 3.8 times more common in adenocarcinomas of never smokers from North America and Europe than in those from East Asia, whereas a higher prevalence of EGFR and TP53 mutations was observed in adenocarcinomas of never smokers from East Asia. Signature SBS40a, with unknown cause6, contributed the largest proportion of single base substitutions in adenocarcinomas, and was enriched in cases with EGFR mutations. Signature SBS22a, which is associated with exposure to aristolochic acid7,8, was observed almost exclusively in patients from Taiwan. Exposure to secondhand smoke was not associated with individual driver mutations or mutational signatures. By contrast, patients from regions with high levels of air pollution were more likely to have TP53 mutations and shorter telomeres. They also exhibited an increase in most types of mutations, including a 3.9-fold increase in signature SBS4, which has previously been linked with tobacco smoking9, and a 76% increase in the clock-like10 signature SBS5. A positive dose–response effect was observed with air-pollution levels, correlating with both a decrease in telomere length and an increase in somatic mutations, mainly attributed to signatures SBS4 and SBS5. Our results elucidate the diversity of mutational processes shaping the genomic landscape of lung cancer in never smokers.