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The Space Omics and Medical Atlas (SOMA) and international astronaut biobank

  • Eliah G. Overbey,
  • JangKeun Kim,
  • Braden T. Tierney,
  • Jiwoon Park,
  • Nadia Houerbi,
  • Alexander G. Lucaci,
  • Sebastian Garcia Medina,
  • Namita Damle,
  • Deena Najjar,
  • Kirill Grigorev,
  • Evan E. Afshin,
  • Krista A. Ryon,
  • Karolina Sienkiewicz,
  • Laura Patras,
  • Remi Klotz,
  • Veronica Ortiz,
  • Matthew MacKay,
  • Annalise Schweickart,
  • Christopher R. Chin,
  • Maria A. Sierra,
  • Matias F. Valenzuela,
  • Ezequiel Dantas,
  • Theodore M. Nelson,
  • Egle Cekanaviciute,
  • Gabriel Deards,
  • Jonathan Foox,
  • S. Anand Narayanan,
  • Caleb M. Schmidt,
  • Michael A. Schmidt,
  • Julian C. Schmidt,
  • Sean Mullane,
  • Seth Stravers Tigchelaar,
  • Steven Levitte,
  • Craig Westover,
  • Chandrima Bhattacharya,
  • Serena Lucotti,
  • Jeremy Wain Hirschberg,
  • Jacqueline Proszynski,
  • Marissa Burke,
  • Ashley S. Kleinman,
  • Daniel J. Butler,
  • Conor Loy,
  • Omary Mzava,
  • Joan Lenz,
  • Doru Paul,
  • Christopher Mozsary,
  • Lauren M. Sanders,
  • Lynn E. Taylor,
  • Chintan O. Patel,
  • Sharib A. Khan,
  • Mir Suhail Mohamad,
  • Syed Gufran Ahmad Byhaqui,
  • Burhan Aslam,
  • Aaron S. Gajadhar,
  • Lucy Williamson,
  • Purvi Tandel,
  • Qiu Yang,
  • Jessica Chu,
  • Ryan W. Benz,
  • Asim Siddiqui,
  • Daniel Hornburg,
  • Kelly Blease,
  • Juan Moreno,
  • Andrew Boddicker,
  • Junhua Zhao,
  • Bryan Lajoie,
  • Ryan T. Scott,
  • Rachel R. Gilbert,
  • San-huei Lai Polo,
  • Andrew Altomare,
  • Semyon Kruglyak,
  • Shawn Levy,
  • Ishara Ariyapala,
  • Joanne Beer,
  • Bingqing Zhang,
  • Briana M. Hudson,
  • Aric Rininger,
  • Sarah E. Church,
  • Afshin Beheshti,
  • George M. Church,
  • Scott M. Smith,
  • Brian E. Crucian,
  • Sara R. Zwart,
  • Irina Matei,
  • David C. Lyden,
  • Francine Garrett-Bakelman,
  • Jan Krumsiek,
  • Qiuying Chen,
  • Dawson Miller,
  • Joe Shuga,
  • Stephen Williams,
  • Corey Nemec,
  • Guy Trudel,
  • Martin Pelchat,
  • Odette Laneuville,
  • Iwijn De Vlaminck,
  • Steven Gross,
  • Kelly L. Bolton,
  • Susan M. Bailey,
  • Richard Granstein,
  • David Furman,
  • Ari M. Melnick,
  • Sylvain V. Costes,
  • Bader Shirah,
  • Min Yu,
  • Anil S. Menon,
  • Jaime Mateus,
  • Cem Meydan,
  • Christopher E. Mason

摘要

Spaceflight induces molecular, cellular and physiological shifts in astronauts and poses myriad biomedical challenges to the human body, which are becoming increasingly relevant as more humans venture into space16. Yet current frameworks for aerospace medicine are nascent and lag far behind advancements in precision medicine on Earth, underscoring the need for rapid development of space medicine databases, tools and protocols. Here we present the Space Omics and Medical Atlas (SOMA), an integrated data and sample repository for clinical, cellular and multi-omic research profiles from a diverse range of missions, including the NASA Twins Study7, JAXA CFE study8,9, SpaceX Inspiration4 crew1012, Axiom and Polaris. The SOMA resource represents a more than tenfold increase in publicly available human space omics data, with matched samples available from the Cornell Aerospace Medicine Biobank. The Atlas includes extensive molecular and physiological profiles encompassing genomics, epigenomics, transcriptomics, proteomics, metabolomics and microbiome datasets, which reveal some consistent features across missions, including cytokine shifts, telomere elongation and gene expression changes, as well as mission-specific molecular responses and links to orthologous, tissue-specific mouse datasets. Leveraging the datasets, tools and resources in SOMA can help to accelerate precision aerospace medicine, bringing needed health monitoring, risk mitigation and countermeasure data for upcoming lunar, Mars and exploration-class missions.