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Sensing and guiding cell-state transitions by using genetically encoded endoribonuclease-mediated microRNA sensors

  • Lei Wang,
  • Wenlong Xu,
  • Shun Zhang,
  • Gregory C. Gundberg,
  • Christine R. Zheng,
  • Zhengpeng Wan,
  • Kamila Mustafina,
  • Fabio Caliendo,
  • Hayden Sandt,
  • Roger Kamm,
  • Ron Weiss

摘要

Precisely sensing and guiding cell-state transitions via the conditional genetic activation of appropriate differentiation factors is challenging. Here we show that desired cell-state transitions can be guided via genetically encoded sensors, whereby endogenous cell-state-specific miRNAs regulate the translation of a constitutively transcribed endoribonuclease, which, in turn, controls the translation of a gene of interest. We used this approach to monitor several cell-state transitions, to enrich specific cell types and to automatically guide the multistep differentiation of human induced pluripotent stem cells towards a haematopoietic lineage via endothelial cells as an intermediate state. Such conditional activation of gene expression is durable and resistant to epigenetic silencing and could facilitate the monitoring of cell-state transitions in physiological and pathological conditions and eventually the ‘rewiring’ of cell-state transitions for applications in organoid-based disease modelling, cellular therapies and regenerative medicine.