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Experimental human colonisation with non-toxigenic Clostridioides difficile: a placebo-controlled randomised clinical trial

  • A. D. O. Hensen,
  • C. Harmanus,
  • P. H. Verbeek-Menken,
  • J. P. R. Koopman,
  • O. A. C. Lamers,
  • G. V. T. Roozen,
  • J. J. Janse,
  • M. Balke-Buijs,
  • M. Y. E. C. van der Stoep,
  • P. Meij,
  • I. M. van Amerongen-Westra,
  • P. Schipper,
  • C. Crul,
  • L. Pattacini,
  • K. Rox,
  • F. Farowski,
  • A. Tsakmaklis,
  • M. J. G. T. Vehreschild,
  • E. J. Kuijper,
  • W. K. Smits,
  • M. Roestenberg

摘要

Clostridioides difficile infections remain a major global healthcare burden, underscoring the need for novel therapies. Human colonisation models provide mechanistic insight into C. difficile colonisation and facilitate identification of novel intervention targets. We conducted a placebo-controlled, randomised clinical trial (NCT05693077) administering non-toxigenic C. difficile (NTCD) capsules to healthy participants to assess safety and colonisation as primary endpoints, and microbiota susceptibility as a secondary endpoint. A total of 69 healthy participants (18-45 years), not previously colonised with C. difficile and without recent antibiotic use, were enrolled following a health assessment. NTCD capsules administered for five consecutive days at low or high dose, was safe with no dose-response relationship in colonisation outcomes. Vancomycin pretreatment induced colonisation success: with 5% colonisation without, 32% after one day, and 84% after five days vancomycin pretreatment. Some participants that cleared vancomycin rapidly acquired non-challenge C. difficile strains prior to NTCD challenge. Microbiota profiling (using shotgun metagenomics) revealed reduced α-diversity and pronounced community restructuring. These findings highlight the impact of antibiotic-mediated microbiota disruption, the widespread environmental presence of C. difficile, and the feasibility of meaningful microbiota assessment in small-scale intervention trials, thereby providing a robust tool to investigate this globally impactful infection.