<p>Rare coding variants that alter protein function and confer beneficial health effects can suggest potential drug targets. <i>CHRNB3</i> encodes the β3 subunit of nicotinic acetylcholine receptors that bind nicotine and mediate its action in the brain. Here we report an exome-wide association study of number of cigarettes smoked per day (cig per day) in 37,897 current smokers from the Mexico City Prospective Study. We identify a deleterious missense variant in <i>CHRNB3</i>, p.Glu284Gly, that associates with a significant reduction in daily cigarette consumption. The missense variant is enriched in people of Indigenous Mexican ancestry but rare in other ancestries. We further identify a predicted loss-of-function variant in <i>CHRNB3</i> that significantly associates with reduction in number of smoked cigarettes per day in participants of Japan Biobank. This variant is enriched in people of East Asian ancestry but is rare in other ancestries. Finally, we find that rare deleterious missense and predicted loss-of-function variants in aggregate associate with a reduction in the number of smoked cigarettes per day in individuals of European ancestry from the UK Biobank. Our results suggest that loss of function of <i>CHRNB3</i> significantly associates with daily cigarette smoking, proposing β3 inhibition as a potential therapeutic strategy for nicotine addiction.</p>

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Rare coding variants in CHRNB3 associate with reduced daily cigarette smoking across ancestries

  • Veera M. Rajagopal,
  • Andrey Ziyatdinov,
  • Tyler Joseph,
  • Ariane Ayer,
  • Mohsin Ahmed,
  • Joelle Mbatchou,
  • Yuxin Zou,
  • Amelia J. Averitt,
  • Nilanjana Banerjee,
  • Michael Cantor,
  • Jason M. Torres,
  • Esteban Chen,
  • Jennifer Rico Varela,
  • Gonçalo Abecasis,
  • Adolfo Ferrando,
  • Andrew Deubler,
  • Luca A. Lotta,
  • John D. Overton,
  • Jeffrey G. Reid,
  • Alan Shuldiner,
  • Katherine Siminovitch,
  • Jason Portnoy,
  • Marcus B. Jones,
  • Lyndon Mitnaul,
  • Alison Fenney,
  • Manuel Allen Revez Ferreira,
  • Maya Ghoussaini,
  • Mona Nafde,
  • William Salerno,
  • Cristen J. Willer,
  • Lourdes Crane,
  • Christina Beechert,
  • Erin Fuller,
  • Laura M. Cremona,
  • Eugene Kalyuskin,
  • Hang Du,
  • Caitlin Forsythe,
  • Zhenhua Gu,
  • Kristy Guevara,
  • Michael Lattari,
  • Alexander Lopez,
  • Kia Manoochehri,
  • Prathyusha Challa,
  • Manasi Pradhan,
  • Raymond Reynoso,
  • Ricardo Schiavo,
  • Maria Sotiropoulos Padilla,
  • Chenggu Wang,
  • Sarah E. Wolf,
  • Manan Goyal,
  • George Mitra,
  • Sanjay Sreeram,
  • Rouel Lanche,
  • Vrushali Mahajan,
  • Sai Lakshmi Vasireddy,
  • Gisu Eom,
  • Krishna Pawan Punuru,
  • Sujit Gokhale,
  • Benjamin Sultan,
  • Pooja Mule,
  • Mudasar Sarwar,
  • Muhammad Aqeel,
  • Xiaodong Bai,
  • Lance Zhang,
  • Sean O’Keeffe,
  • Razvan Panea,
  • Evan Edelstein,
  • Ayesha Rasool,
  • Evan K. Maxwell,
  • Boris Boutkov,
  • Alexander Gorovits,
  • Ju Guan,
  • Lukas Habegger,
  • Alicia Hawes,
  • Olga Krasheninina,
  • Samantha Zarate,
  • Adam J. Mansfield,
  • Joshua Backman,
  • Kathy Burch,
  • Adrian Campos,
  • Liron Ganel,
  • Sheila Gaynor,
  • Benjamin Geraghty,
  • Arkopravo Ghosh,
  • Salvador Romero Martinez,
  • Christopher Gillies,
  • Lauren Gurski,
  • Eric Jorgenson,
  • Michael Kessler,
  • Jack Kosmicki,
  • Adam Locke,
  • Priyanka Nakka,
  • Karl Landheer,
  • Olivier Delaneau,
  • Anthony Marcketta,
  • Arden Moscati,
  • Anita Pandit,
  • Jonathan Ross,
  • Carlo Sidore,
  • Eli Stahl,
  • Timothy Thornton,
  • Sailaja Vedantam,
  • Rujin Wang,
  • Kuan-Han Wu,
  • Bin Ye,
  • Blair Zhang,
  • Jingning Zhang,
  • Kyoko Watanabe,
  • Mira Tang,
  • Frank Wendt,
  • Suganthi Balasubramanian,
  • Suying Bao,
  • Kathie Sun,
  • Chuanyi Zhang,
  • Sean Yu,
  • Aaron Zhang,
  • David Corrigan,
  • Dhruv Shidhaye,
  • Chen Wang,
  • Keyrun Adhikari,
  • Alexander Lachmann,
  • Brian Hobbs,
  • Jon Silver,
  • William Palmer,
  • Rita Guerreiro,
  • Amit Joshi,
  • Antoine Baldassari,
  • Sarah Graham,
  • Ernst Mayerhofer,
  • Erola Pairo Castineira,
  • Mary Haas,
  • Niek Verweij,
  • George Hindy,
  • Jonas Bovijn,
  • Tanima De,
  • Luanluan Sun,
  • Olukayode Sosina,
  • Arthur Gilly,
  • Peter Dornbos,
  • Juan Rodriguez-Flores,
  • Moeen Riaz,
  • Manav Kapoor,
  • Gannie Tzoneva,
  • Momodou W. Jallow,
  • Anna Alkelai,
  • Veera Rajagopal,
  • Sahar Gelfman,
  • Vijay Kumar,
  • Jacqueline Otto,
  • Jose Bras,
  • Silvia Alvarez,
  • Jessie Brown,
  • Hossein Khiabanian,
  • Joana Revez,
  • Kimberly Skead,
  • Valentina Zavala,
  • Jae Soon Sul,
  • Lei Chen,
  • Sam Choi,
  • Amy Damask,
  • Nan Lin,
  • Charles Paulding,
  • Sameer Malhotra,
  • Joseph Herman,
  • Michelle G. LeBlanc,
  • Nadia Rana,
  • Jennifer Rico-Varela,
  • Jaimee Hernandez,
  • Larizbeth Romero,
  • Ashley Paynter,
  • Randi Schwartz,
  • Jody Hankins,
  • Anna Han,
  • Samuel Hart,
  • Ryan Smith,
  • Ann Perez-Beals,
  • Gina Solari,
  • Johannie Rivera-Picart,
  • Michelle Pagan,
  • Sunilbe Siceron,
  • Marcus Jones,
  • John Overton,
  • Olivier Harari,
  • Luca Lotta,
  • Gonçalo Abecasis,
  • Aris Baras,
  • Jaime Berumen,
  • Pablo Kuri-Morales,
  • Jesús Alegre-Díaz,
  • Roberto Tapia-Conyer,
  • Rory Collins,
  • Jonathan R. Emberson,
  • Jonathan Marchini,
  • Giovanni Coppola

摘要

Rare coding variants that alter protein function and confer beneficial health effects can suggest potential drug targets. CHRNB3 encodes the β3 subunit of nicotinic acetylcholine receptors that bind nicotine and mediate its action in the brain. Here we report an exome-wide association study of number of cigarettes smoked per day (cig per day) in 37,897 current smokers from the Mexico City Prospective Study. We identify a deleterious missense variant in CHRNB3, p.Glu284Gly, that associates with a significant reduction in daily cigarette consumption. The missense variant is enriched in people of Indigenous Mexican ancestry but rare in other ancestries. We further identify a predicted loss-of-function variant in CHRNB3 that significantly associates with reduction in number of smoked cigarettes per day in participants of Japan Biobank. This variant is enriched in people of East Asian ancestry but is rare in other ancestries. Finally, we find that rare deleterious missense and predicted loss-of-function variants in aggregate associate with a reduction in the number of smoked cigarettes per day in individuals of European ancestry from the UK Biobank. Our results suggest that loss of function of CHRNB3 significantly associates with daily cigarette smoking, proposing β3 inhibition as a potential therapeutic strategy for nicotine addiction.