<p>Proximity-inducing modalities that co-opt cellular pathways offer new opportunities to regulate oncogenic drivers. Inspired by the success of proximity-based chimeras in both intracellular and extracellular target space, here we describe the development of <Emphasis Type="Underline">LY</Emphasis>sosome <Emphasis Type="Underline">M</Emphasis>embrane <Emphasis Type="Underline">TA</Emphasis>rgeting <Emphasis Type="Underline">C</Emphasis>himera<Emphasis Type="Underline">s</Emphasis> (LYMTACs) as a small molecule-based platform that functions intracellularly to modulate the membrane proteome. Conceptually, LYMTACs are heterobifunctional small molecules that co-opt short-lived lysosomal membrane proteins (LMPs) as effectors to deliver targets for lysosomal degradation. We demonstrate that a promiscuous kinase inhibitor-based LYMTAC selectively targets membrane proteins for lysosomal degradation via RNF152, a short-lived LMP. We extend this concept by showing that oncogenic KRAS<sup>G12D</sup> signaling can be potently inhibited by LYMTACs. Mechanistically, LYMTACs display multi-pharmacology and exert their activity through both target relocalization into the lysosome and degradation. We further generalize LYMTACs across various LMPs and thus offer a platform to access challenging membrane proteins through targeted protein relocalization and degradation.</p>

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LYMTACs:chimeric small molecules repurpose lysosomal membrane proteins for target protein relocalization and degradation

  • Dhanusha A. Nalawansha,
  • Georgios Mazis,
  • Gitte Husemoen,
  • Kate S. Ashton,
  • Weixian Deng,
  • Ryan P. Wurz,
  • Anh T. Tran,
  • Brian A. Lanman,
  • Jiansong Xie,
  • Robert G. Guenette,
  • Shiqian Li,
  • Christopher E. Smith,
  • Suresh Archunan,
  • Manoj K. Agnihotram,
  • Arghya Sadhukhan,
  • Rajiv Kapoor,
  • Chris Wilde,
  • Sajjan Koirala,
  • Felipe De Sousa E Melo,
  • Patrick Ryan Potts

摘要

Proximity-inducing modalities that co-opt cellular pathways offer new opportunities to regulate oncogenic drivers. Inspired by the success of proximity-based chimeras in both intracellular and extracellular target space, here we describe the development of LYsosome Membrane TArgeting Chimeras (LYMTACs) as a small molecule-based platform that functions intracellularly to modulate the membrane proteome. Conceptually, LYMTACs are heterobifunctional small molecules that co-opt short-lived lysosomal membrane proteins (LMPs) as effectors to deliver targets for lysosomal degradation. We demonstrate that a promiscuous kinase inhibitor-based LYMTAC selectively targets membrane proteins for lysosomal degradation via RNF152, a short-lived LMP. We extend this concept by showing that oncogenic KRASG12D signaling can be potently inhibited by LYMTACs. Mechanistically, LYMTACs display multi-pharmacology and exert their activity through both target relocalization into the lysosome and degradation. We further generalize LYMTACs across various LMPs and thus offer a platform to access challenging membrane proteins through targeted protein relocalization and degradation.