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Unveiling the solution structure of a DNA duplex with continuous silver-modified Watson-Crick base pairs

  • Uroš Javornik,
  • Antonio Pérez-Romero,
  • Carmen López-Chamorro,
  • Rachelle M. Smith,
  • José A. Dobado,
  • Oscar Palacios,
  • Mrinal K. Bera,
  • May Nyman,
  • Janez Plavec,
  • Miguel A. Galindo

摘要

The challenge of transforming organized DNA structures into their metallized counterparts persists in the scientific field. In this context, utilizing DNA molecules modified with 7-deazapurine, provides a transformative solution. In this study, we present the solution structure of a DNA duplex that can be transformed into its metallized equivalent while retaining the natural base pairing arrangement through the creation of silver-modified Watson-Crick base pairs. Unlike previously documented X-ray structures, our research demonstrates the feasibility of preserving the intrinsic DNA self-assembly while incorporating AgI into the double helix, illustrating that the binding of silver does not disrupt the canonical base-pairing organization. Moreover, in our case, the uninterrupted AgI chain deviates from forming conventional straight linear chains; instead, it adheres to a helical arrangement dictated by the underlying DNA structure. This research challenges conventional assumptions and opens the door to precisely design structures based on the organization of highly stable Ag-DNA assemblies.