Allelic variation and differential expression of cassava bacterial blight resistance candidate genes
摘要
Cassava bacterial blight (CBB) is the most limiting bacterial disease in the production of this crop. The growth of resistant varieties is the most efficient strategy for managing disease, even though the genetic bases of CBB resistance are not fully understood. Here we aim to identify allelic variants associated with CBB resistance in candidate genes Manes.08G041100 and Manes.13G039400, which encode for defensin and subtilisin, respectively. The expression of these genes was evaluated in cassava genotypes with contrasting responses to inoculation by Xanthomonas phaseoli pv. manihotis (Xpm). In vitro phenotyping allowed us to describe the response to infection in 10 cassava genotypes. Despite no SNV-phenotype association from the statistical analysis, candidate gene expression was induced at 50 hpi, with differential expression of Manes.08G041100 between contrasting genotypes. This study contributes for understanding the molecular basis of the Xanthomonas-cassava interaction and validates candidate CBB resistance genes.