Multi-channel Electroencephalogram (EEG) based emotion recognition is focused on several analysis of frequency bands of the acquired signals. In this paper, spectral properties appeared on five EEG bands ( \(\delta \) , \(\theta \) , \(\alpha \) , \(\beta \) , \(\gamma \) ) and gated transformer network (GTN) based emotion recognition using EEG signal are proposed. Spectral energies and differential entropies of 62-channel signals are converted to 3D (sequence-channel-trial) form to feed the GTN. The GTN with enhanced gated two tower based transformer architecture is fed by 3D sequences extracted from SEED and SEED-IV emotional datasets. 15 participants’ states in session 1–3 are evaluated using the proposed GTN based sequence classification, and the results are repeated by \(3\small \times \) shuffling. Totally, 135 times training and testing are performed on each dataset, and the results are presented. The proposed GTN model achieves mean accuracy rates of 98.82% on the SEED dataset and 96.77% on the SEED-IV dataset for three and four emotional state recognition tasks, respectively. The proposed emotion recognition model can be employed as a promising approach for EEG emotion recognition.