<p>Age acceleration, or the difference between biological and chronological age, is a research area of growing interest, particularly in the field of age-related and neurodegenerative disorders, including Alzheimer’s disease (AD). First-generation epigenetic clocks that predict chronological age utilising DNA methylation data were the first to derive estimates of age acceleration, which have been associated with several age-related conditions. More recently, second-generation epigenetic clocks that are predictors of specific traits such as age-related health, disease or morbidity and mortality phenotypes have been developed. These are considered better predictors of health-related traits and show stronger associations with lifespan and mortality than most first-generation clocks. This study aimed to extend on our previous findings of associations of first-generation clocks with hippocampal volume, by investigating the relationship between ten second-generation clocks and brain volumetrics, brain Aβ burden and cognition in the Australian Imaging, Biomarkers and Lifestyle (AIBL) and Alzheimer’s Disease Neuroimaging Initiative (ADNI) cohorts. Significant associations were found between age acceleration, as estimated by the Principal Components PhenoAge (PCPhenoAge) epigenetic clock, and hippocampal volume in the AIBL study, with replication in the ADNI dataset. Several other significant cross-sectional findings were observed between hippocampal volume and GrimAge, PCGrimAge, PCHorvathS2013, PCHorvathS2018 and PCHannumG2013 and between a DNA methylation-derived estimate of telomere length and change in brain Aβ burden. However, these results were not validated in the ADNI cohort. This investigation of second-generation epigenetic clocks further adds to the body of existing literature on the application of epigenetic clocks in relation to the ageing process and in the development of AD-related traits.</p> Graphical Abstract <p></p>

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Analysis of second-generation epigenetic clocks reveals further associations between disproportionate biological ageing and hippocampal volume

  • Lidija Milicic,
  • Michael Vacher,
  • Vincent Doré,
  • Pierrick Bourgeat,
  • Rosita Shishegar,
  • James D. Doecke,
  • Paul Maruff,
  • Christopher C. Rowe,
  • Victor L. Villemagne,
  • Michael Weiner,
  • Paul Aisen,
  • Ronald Petersen,
  • Clifford R. Jack Jr,
  • William Jagust,
  • John Q. Trojanowki,
  • Arthur W. Toga,
  • Laurel Beckett,
  • Robert C. Green,
  • Andrew J. Saykin,
  • Leslie M. Shaw,
  • Enchi Liu,
  • Tom Montine,
  • Ronald G. Thomas,
  • Michael Donohue,
  • Sarah Walter,
  • Devon Gessert,
  • Tamie Sather,
  • Gus Jiminez,
  • Danielle Harvey,
  • Matthew Bernstein,
  • Nick Fox,
  • Paul Thompson,
  • Norbert Schuff,
  • Charles DeCArli,
  • Bret Borowski,
  • Jeff Gunter,
  • Matt Senjem,
  • Prashanthi Vemuri,
  • David Jones,
  • Kejal Kantarci,
  • Chad Ward,
  • Robert A. Koeppe,
  • Norm Foster,
  • Eric M. Reiman,
  • Kewei Chen,
  • Chet Mathis,
  • Susan Landau,
  • John C. Morris,
  • Nigel J. Cairns,
  • Erin Householder,
  • Lisa Taylor Reinwald,
  • Virginia Lee,
  • Magdalena Korecka,
  • Michal Figurski,
  • Karen Crawford,
  • Scott Neu,
  • Tatiana M. Foroud,
  • Steven Potkin,
  • Li Shen,
  • Faber Kelley,
  • Sungeun Kim,
  • Kwangsik Nho,
  • Zaven Kachaturian,
  • Richard Frank,
  • Peter J. Snyder,
  • Susan Molchan,
  • Jeffrey Kaye,
  • Joseph Quinn,
  • Betty Lind,
  • Raina Carter,
  • Sara Dolen,
  • Lon S. Schneider,
  • Sonia Pawluczyk,
  • Mauricio Beccera,
  • Liberty Teodoro,
  • Bryan M. Spann,
  • James Brewer,
  • Helen Vanderswag,
  • Adam Fleisher,
  • Judith L. Heidebrink,
  • Joanne L. Lord,
  • Ronald Petersen,
  • Sara S. Mason,
  • Colleen S. Albers,
  • David Knopman,
  • Kris Johnson,
  • Rachelle S. Doody,
  • Javier Villanueva Meyer,
  • Munir Chowdhury,
  • Susan Rountree,
  • Mimi Dang,
  • Yaakov Stern,
  • Lawrence S. Honig,
  • Karen L. Bell,
  • Beau Ances,
  • Maria Carroll,
  • Sue Leon,
  • Erin Householder,
  • Mark A. Mintun,
  • Stacy Schneider,
  • Angela OliverNG,
  • Randall Griffith,
  • David Clark,
  • David Geldmacher,
  • John Brockington,
  • Erik Roberson,
  • Hillel Grossman,
  • Effie Mitsis,
  • Leyla deToledo-Morrell,
  • Raj C. Shah,
  • Ranjan Duara,
  • Daniel Varon,
  • Maria T. Greig,
  • Peggy Roberts,
  • Marilyn Albert,
  • Chiadi Onyike,
  • Daniel D’Agostino II,
  • Stephanie Kielb,
  • James E. Galvin,
  • Dana M. Pogorelec,
  • Brittany Cerbone,
  • Christina A. Michel,
  • Henry Rusinek,
  • Mony J. de Leon,
  • Lidia Glodzik,
  • Susan De Santi,
  • P. Murali Doraiswamy,
  • Jeffrey R. Petrella,
  • Terence Z. Wong,
  • Steven E. Arnold,
  • Jason H. Karlawish,
  • David A. Wolk,
  • Charles D. Smith,
  • Greg Jicha,
  • Peter Hardy,
  • Partha Sinha,
  • Elizabeth Oates,
  • Gary Conrad,
  • Oscar L. Lopez,
  • MaryAnn Oakley,
  • Donna M. Simpson,
  • Anton P. Porsteinsson,
  • Bonnie S. Goldstein,
  • Kim Martin,
  • Kelly M. Makino,
  • M. Saleem Ismail,
  • Connie Brand,
  • Ruth A. Mulnard,
  • Gaby Thai,
  • Catherine Mc Adams Ortiz,
  • Kyle Womack,
  • Dana Mathews,
  • Mary Quiceno,
  • Ramon Diaz Arrastia,
  • Richard King,
  • Myron Weiner,
  • Kristen Martin Cook,
  • Michael DeVous,
  • Allan I. Levey,
  • James J. Lah,
  • Janet S. Cellar,
  • Jeffrey M. Burns,
  • Heather S. Anderson,
  • Russell H. Swerdlow,
  • Liana Apostolova,
  • Kathleen Tingus,
  • Ellen Woo,
  • Daniel H. S. Silverman,
  • Po H. Lu,
  • George Bartzokis,
  • Neill R. Graff Radford,
  • Francine ParfittH,
  • Tracy Kendall,
  • Heather Johnson,
  • Martin R. Farlow,
  • Ann Marie Hake,
  • Brandy R. Matthews,
  • Scott Herring,
  • Cynthia Hunt,
  • Christopher H. van Dyck,
  • Richard E. Carson,
  • Martha G. MacAvoy,
  • Howard Chertkow,
  • Howard Bergman,
  • Chris Hosein,
  • Sandra Black,
  • Bojana Stefanovic,
  • Curtis Caldwell,
  • Ging Yuek Robin Hsiung,
  • Howard Feldman,
  • Benita Mudge,
  • Michele Assaly Past,
  • Andrew Kertesz,
  • John Rogers,
  • Dick Trost,
  • Charles Bernick,
  • Donna Munic,
  • Diana Kerwin,
  • Marek Marsel Mesulam,
  • Kristine Lipowski,
  • Chuang Kuo Wu,
  • Nancy Johnson,
  • Carl Sadowsky,
  • Walter Martinez,
  • Teresa Villena,
  • Raymond Scott Turner,
  • Kathleen Johnson,
  • Brigid Reynolds,
  • Reisa A. Sperling,
  • Keith A. Johnson,
  • Gad Marshall,
  • Meghan Frey,
  • Jerome Yesavage,
  • Joy L. Taylor,
  • Barton Lane,
  • Allyson Rosen,
  • Jared Tinklenberg,
  • Marwan N. Sabbagh,
  • Christine M. Belden,
  • Sandra A. Jacobson,
  • Sherye A. Sirrel,
  • Neil Kowall,
  • Ronald Killiany,
  • Andrew E. Budson,
  • Alexander Norbash,
  • Patricia Lynn Johnson,
  • Thomas O. Obisesan,
  • Saba Wolday,
  • Joanne Allard,
  • Alan Lerner,
  • Paula Ogrocki,
  • Leon Hudson,
  • Evan Fletcher,
  • Owen Carmichael,
  • John Olichney,
  • Charles DeCarli,
  • Smita Kittur,
  • Michael Borrie,
  • T. Y. Lee,
  • Rob Bartha,
  • Sterling Johnson,
  • Sanjay Asthana,
  • Cynthia M. Carlsson,
  • Steven G. Potkin,
  • Adrian Preda,
  • Dana Nguyen,
  • Pierre Tariot,
  • Adam Fleisher,
  • Stephanie Reeder,
  • Vernice Bates,
  • Horacio Capote,
  • Michelle Rainka,
  • Douglas W. Scharre,
  • Maria Kataki,
  • Anahita Adeli,
  • Earl A. Zimmerman,
  • Dzintra Celmins,
  • Alice D. Brown,
  • Godfrey D. Pearlson,
  • Karen Blank,
  • Karen Anderson,
  • Robert B. Santulli,
  • Tamar J. Kitzmiller,
  • Eben S. Schwartz,
  • Kaycee M. SinkS,
  • Jeff D. Williamson,
  • Pradeep Garg,
  • Franklin Watkins,
  • Brian R. Ott,
  • Henry Querfurth,
  • Geoffrey Tremont,
  • Stephen Salloway,
  • Paul Malloy,
  • Stephen Correia,
  • Howard J. Rosen,
  • Bruce L. Miller,
  • Jacobo Mintzer,
  • Kenneth Spicer,
  • David Bachman,
  • Elizabether Finger,
  • Stephen Pasternak,
  • Irina Rachinsky,
  • John Rogers,
  • Andrew Kertesz,
  • Dick Drost,
  • Nunzio Pomara,
  • Raymundo Hernando,
  • Antero Sarrael,
  • Susan K. Schultz,
  • Laura L. Boles Ponto,
  • Hyungsub Shim,
  • Karen Elizabeth Smith,
  • Norman Relkin,
  • Gloria Chaing,
  • Lisa Raudin,
  • Amanda Smith,
  • Kristin Fargher,
  • Balebail Ashok Raj,
  • Christopher Fowler,
  • Stephanie R. Rainey-Smith,
  • Sabine Bird,
  • Julia Bomke,
  • Pierrick Bourgeat,
  • Belinda M. Brown,
  • Samantha C. Burnham,
  • Ashley I. Bush,
  • Carolyn Chadunow,
  • Steven Collins,
  • James Doecke,
  • Vincent Dore,
  • Kathryn A. Ellis,
  • Lis Evered,
  • Amir Fazlollahi,
  • Jurgen Fripp,
  • Samantha L. Gardener,
  • Simon Gibson,
  • Robert Grenfell,
  • Elise Harrison,
  • Richard Head,
  • Liang Jin,
  • Adrian Kamer,
  • Fiona Lamb,
  • Nicola T. Lautenschlager,
  • Simon M. Laws,
  • Qiao-Xin Li,
  • Lucy Lim,
  • Yen Ying Lim,
  • Andrea Louey,
  • Lucy Mackintosh,
  • Ralph N. Martins,
  • Paul Maruff,
  • Colin L. Masters,
  • Simon McBride,
  • Lidija Milicic,
  • Kelly Pertile,
  • Tenielle Porter,
  • Morgan Radler,
  • Joanne Robertson,
  • Mark Rodrigues,
  • Christopher C. Rowe,
  • Rebecca Rumble,
  • Olivier Salvado,
  • Greg Savage,
  • Rosita Shishegar,
  • Brendan Silbert,
  • Magdalene Soh,
  • Hamid R. Sohrabi,
  • Kevin Taddei,
  • Tania Taddei,
  • Christine Thai,
  • Brett Trounson,
  • Regan Tyrrell,
  • Michael Vacher,
  • Shiji Varghese,
  • Victor L. Villemagne,
  • Michael Weinborn,
  • Michael Woodward,
  • Ying Xia,
  • David Ames,
  • Tenielle Porter,
  • Simon M. Laws

摘要

Age acceleration, or the difference between biological and chronological age, is a research area of growing interest, particularly in the field of age-related and neurodegenerative disorders, including Alzheimer’s disease (AD). First-generation epigenetic clocks that predict chronological age utilising DNA methylation data were the first to derive estimates of age acceleration, which have been associated with several age-related conditions. More recently, second-generation epigenetic clocks that are predictors of specific traits such as age-related health, disease or morbidity and mortality phenotypes have been developed. These are considered better predictors of health-related traits and show stronger associations with lifespan and mortality than most first-generation clocks. This study aimed to extend on our previous findings of associations of first-generation clocks with hippocampal volume, by investigating the relationship between ten second-generation clocks and brain volumetrics, brain Aβ burden and cognition in the Australian Imaging, Biomarkers and Lifestyle (AIBL) and Alzheimer’s Disease Neuroimaging Initiative (ADNI) cohorts. Significant associations were found between age acceleration, as estimated by the Principal Components PhenoAge (PCPhenoAge) epigenetic clock, and hippocampal volume in the AIBL study, with replication in the ADNI dataset. Several other significant cross-sectional findings were observed between hippocampal volume and GrimAge, PCGrimAge, PCHorvathS2013, PCHorvathS2018 and PCHannumG2013 and between a DNA methylation-derived estimate of telomere length and change in brain Aβ burden. However, these results were not validated in the ADNI cohort. This investigation of second-generation epigenetic clocks further adds to the body of existing literature on the application of epigenetic clocks in relation to the ageing process and in the development of AD-related traits.

Graphical Abstract