Molecular basis of heavy metal tolerance in the marine actinomycete Nocardiopsis dassonvillei NCIM 5124
摘要
A variety of microorganisms are able to tolerate metals that are prevalent in the environment. In the current study, insights into heavy metal tolerance in the tropical marine Actinobacterium – Nocardiopsis dassonvillei NCIM 5124 are presented. The organism was able to tolerate metals in the order Cd2+ > Cr3+ > Cu2+ = Ni2+ (1.0 to 5.0 mM) and Cr6+ > Pb2+ > Hg2+ (0.1 to 0.5 mM). Two metals Cd2+ and Cr6+ were considered during further studies. Field emission scanning electron microscope observations displayed a decrease in filament width (compared to control samples) and revealed metal deposits on the cell surfaces. Signature peaks observed in the energy dispersive X- ray spectra confirmed the metal-microbe interactions. The whole genome sequence revealed the presence of efflux transporters, redox/detoxifying enzymes, regulatory elements, metal specific genes, and siderophore complexes that may be relevant in metal tolerance. Transcriptome analysis in the presence of Cd2+ and Cr6+ ions revealed a differential response. With Cd2+ ions, genes encoding metalloregulator ArsR/SmtB family transcription factors, cation-translocating P-type ATPase, cadmium resistance transporter, MerR family transcriptional regulator were seen to be upregulated. In case of Cr6+ ions, siderophore biosynthesis related genes (IucA/IucC family, iron-siderophore complexes) and phosphate transporters among other genes were upregulated. q-PCR experiments validated the role of specific genes involved in Cd2+ and Cr6+ tolerance. The current study demonstrates the potential of this Actinobacterium in bioremediating heavy metal contaminated sites.