Genome-Wide Analysis of NF-YA Gene Family and Seed Dormancy Release Regulation of PbNF-YA4-like in Pear
摘要
The nuclear factor YA (NF-YA) gene family comprises a class of transcription factors that are widely distributed among eukaryotes and play crucial roles in various biological processes. However, the members of the NF-YA gene family in pear (Pyrus spp.) remain largely uncharacterized, and their functions have not been elucidated. The current study identified a total of 12 NF-YA-related genes from both the wild pear (P. betulifolia) and Chinese white pear (P. bretschneideri). Their protein properties, phylogenetic relationships, motif composition, gene structures, genome synteny, and cis-acting elements were characterized. Furthermore, analysis of the expression patterns of PbNF-YA genes indicated that PbNF-YA3, PbNF-YA4-like, and PbNF-YA6 were predominantly expressed in wild pear seeds, with their expression significantly decreased during the progression of dormancy release. Dual-luciferase and yeast one-hybrid assays demonstrated that PbNF-YA4-like represses PbPP2C2 promoter activity and participates in ABA-mediated seed dormancy release, although PbNF-YA4-like alone did not bind the promoter in yeast. This study elucidates the structure and evolutionary relationships of the NF-YA gene family in pear and highlights the novel function of PbNF-YA4-like in regulating seed dormancy release in wild pear.