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The Intersections of COVID-19, HIV, and Race/Ethnicity: Machine Learning Methods to Identify and Model Risk Factors for Severe COVID-19 in a Large U.S. National Dataset

  • Miranda Kunz,
  • Kollin W. Rott,
  • Eric Hurwitz,
  • Ken Kunisaki,
  • Jing Sun,
  • Kenneth J. Wilkins,
  • Jessica Y. Islam,
  • Rena Patel,
  • Sandra E. Safo,
  • Adam B. Wilcox,
  • Adam M. Lee,
  • Alexis Graves,
  • Alfred Anzalone,
  • Amin Manna,
  • Amit Saha,
  • Amy Olex,
  • Andrea Zhou,
  • Andrew E. Williams,
  • Andrew Southerland,
  • Andrew T. Girvin,
  • Anita Walden,
  • Anjali A. Sharathkumar,
  • Benjamin Amor,
  • Benjamin Bates,
  • Brian Hendricks,
  • Brijesh Patel,
  • Caleb Alexander,
  • Carolyn Bramante,
  • Cavin Ward-Caviness,
  • Charisse Madlock-Brown,
  • Christine Suver,
  • Christopher Chute,
  • Christopher Dillon,
  • Chunlei Wu,
  • Clare Schmitt,
  • Cliff Takemoto,
  • Dan Housman,
  • Davera Gabriel,
  • David A. Eichmann,
  • Diego Mazzotti,
  • Don Brown,
  • Eilis Boudreau,
  • Elaine Hill,
  • Elizabeth Zampino,
  • Emily Carlson Marti,
  • Emily R. Pfaff,
  • Evan French,
  • Farrukh M. Koraishy,
  • Federico Mariona,
  • Fred Prior,
  • George Sokos,
  • Greg Martin,
  • Harold Lehmann,
  • Heidi Spratt,
  • Hemalkumar Mehta,
  • Hongfang Liu,
  • Hythem Sidky,
  • J. W. Awori Hayanga,
  • Jami Pincavitch,
  • Jaylyn Clark,
  • Jeremy Richard Harper,
  • Jessica Islam,
  • Jin Ge,
  • Joel Gagnier,
  • Joel H. Saltz,
  • Joel Saltz,
  • Johanna Loomba,
  • John Buse,
  • Jomol Mathew,
  • Joni L. Rutter,
  • Julie A. McMurry,
  • Justin Guinney,
  • Justin Starren,
  • Karen Crowley,
  • Katie Rebecca Bradwell,
  • Kellie M. Walters,
  • Ken Wilkins,
  • Kenneth R. Gersing,
  • Kenrick Dwain Cato,
  • Kimberly Murray,
  • Kristin Kostka,
  • Lavance Northington,
  • Lee Allan Pyles,
  • Leonie Misquitta,
  • Lesley Cottrell,
  • Lili Portilla,
  • Mariam Deacy,
  • Mark M. Bissell,
  • Marshall Clark,
  • Mary Emmett,
  • Mary Morrison Saltz,
  • Matvey B. Palchuk,
  • Melissa A. Haendel,
  • Meredith Adams,
  • Meredith Temple-O’Connor,
  • Michael G. Kurilla,
  • Michele Morris,
  • Nabeel Qureshi,
  • Nasia Safdar,
  • Nicole Garbarini,
  • Noha Sharafeldin,
  • Ofer Sadan,
  • Patricia A. Francis,
  • Penny Wung Burgoon,
  • Peter Robinson,
  • Philip R. O. Payne,
  • Rafael Fuentes,
  • Randeep Jawa,
  • Rebecca Erwin-Cohen,
  • Richard A. Moffitt,
  • Richard L. Zhu,
  • Rishi Kamaleswaran,
  • Robert Hurley,
  • Robert T. Miller,
  • Saiju Pyarajan,
  • Sam G. Michael,
  • Samuel Bozzette,
  • Sandeep Mallipattu,
  • Satyanarayana Vedula,
  • Scott Chapman,
  • Shawn T. O’Neil,
  • Soko Setoguchi,
  • Stephanie S. Hong,
  • Steve Johnson,
  • Tellen D. Bennett,
  • Tiffany Callahan,
  • Umit Topaloglu,
  • Usman Sheikh,
  • Valery Gordon,
  • Vignesh Subbian,
  • Warren A. Kibbe,
  • Wenndy Hernandez,
  • Will Beasley,
  • Will Cooper,
  • William Hillegass,
  • Xiaohan Tanner Zhang

摘要

We investigate risk factors for severe COVID-19 in persons living with HIV (PWH), including among racialized PWH, using the U.S. population-sampled National COVID Cohort Collaborative (N3C) data released from January 1, 2020 to October 10, 2022. We defined severe COVID-19 as hospitalized with invasive mechanical ventilation, extracorporeal membrane oxygenation, discharge to hospice or death. We used machine learning methods to identify highly ranked, uncorrelated factors predicting severe COVID-19, and used multivariable logistic regression models to assess the associations of these variables with severe COVID-19 in several models, including race-stratified models. There were 3 241 627 individuals with incident COVID-19 cases and 81 549 (2.5%) with severe COVID-19, of which 17 445 incident COVID-19 and 1 020 (5.8%) severe cases were among PWH. The top highly ranked factors of severe COVID-19 were age, congestive heart failure (CHF), dementia, renal disease, sodium concentration, smoking status, and sex. Among PWH, age and sodium concentration were important predictors of COVID-19 severity, and the effect of sodium concentration was more pronounced in Hispanics (aOR 4.11 compared to aOR range: 1.47–1.88 for Black, White, and Other non-Hispanics). Dementia, CHF, and renal disease was associated with higher odds of severe COVID-19 among Black, Hispanic, and Other non-Hispanics PWH, respectively. Our findings suggest that the impact of factors, especially clinical comorbidities, predictive of severe COVID-19 among PWH varies by racialized groups, highlighting a need to account for race and comorbidity burden when assessing the risk of PWH developing severe COVID-19.