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A hybrid feature weighting and selection-based strategy to classify the high-dimensional and imbalanced medical data

  • Harpreet Singh,
  • Manpreet Kaur,
  • Birmohan Singh

摘要

Machine learning algorithms generally assume that the data are balanced in nature. However, medical datasets suffer from the curse of dimensionality and class imbalance problems. The medical datasets are obtained from the patient information which creates an imbalance in class distribution as the number of normal persons is more than the number of patients and contains a large number of features to represent a sample. It tends to the machine learning algorithms biased toward the majority class which degrades their classification performance for minority class samples and increases the computation overhead. Therefore, oversampling, feature selection and feature weighting-based four strategies are proposed to deal with the problems of class imbalance and high dimensionality. The key idea behind the proposed strategies is to generate a balanced sample space along with the optimal weighted feature space of the most relevant and discriminative features. The Synthetic Minority Oversampling Technique is utilized to generate the synthetic minority class samples and reduce the bias toward the majority class. An Improved Elephant Herding Optimization algorithm is applied to select the optimal features and weights for reducing the computation overhead and improving the interpretation ability of the learning algorithms by providing weights to relevant features. In addition, thirteen methods are developed from the proposed strategies to deal with the problems of high-dimensionality and imbalanced data. The optimized \(k\) k -Nearest Neighbor ( \(k\) k -NN) learning algorithm is utilized to perform classification. The performance of the proposed methods is evaluated and compared for sixteen high-dimensional imbalanced medical datasets. Further, Freidman’s mean rank test is applied to show the statistical difference between the proposed methods. Experimental and statistical results show that the proposed Feature Weighting followed by the Feature Selection (FW–FS) method performed significantly better than the other proposed methods for classification accuracy, g-mean, f-score, and AUC metrics. In addition, the performance of the proposed FW–FS method is compared with eleven state-of-the-art algorithms. The results express the effectiveness of the proposed FW–FS method in dealing with high-dimensional imbalanced medical datasets than other state-of-the-art algorithms.