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Cryptic exon inclusion is a molecular signature of LATE-NC in aging brains

  • Mingee Chung,
  • E. Kathleen Carter,
  • Austin M. Veire,
  • Eric B. Dammer,
  • Jianjun Chang,
  • Duc M. Duong,
  • Nisha Raj,
  • Gary J. Bassell,
  • Jonathan D. Glass,
  • Tania F. Gendron,
  • Peter T. Nelson,
  • Allan I. Levey,
  • Nicholas T. Seyfried,
  • Zachary T. McEachin

摘要

The aggregation, mislocalization, and phosphorylation of TDP-43 are pathologic hallmarks of several neurodegenerative diseases and provide a defining criterion for the neuropathologic diagnosis of Limbic-predominant Age-related TDP-43 Encephalopathy (LATE). LATE neuropathologic changes (LATE-NC) are often comorbid with other neurodegenerative pathologies including Alzheimer’s disease neuropathologic changes (ADNC). We examined whether TDP-43 regulated cryptic exons accumulate in the hippocampus of neuropathologically confirmed LATE-NC cases. We found that several cryptic RNAs are robustly expressed in LATE-NC cases with or without comorbid ADNC and correlate with pTDP-43 abundance; however, the accumulation of cryptic RNAs is more robust in LATE-NC with comorbid ADNC. Additionally, cryptic RNAs can robustly distinguish LATE-NC from healthy controls and AD cases. These findings expand our current understanding and provide novel potential biomarkers for LATE pathogenesis.